Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816297.1_cds_XP_016498742.1_12737
CDS Infomation

[gene=LOC107817425] [db_xref=GeneID:107817425] [protein=pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like] [protein_id=XP_016498742.1] [location=complement(107132..108700)] [gbkey=CDS]
Sequence

ATGAAGTTCTATGCTAGAAAACTGCCCTTTAGATACATATCTGTTTCTCTCCCATTTGGG
GTTTGTAACATTTCTAATGTACCATGTAAAAGTTGCTTTAGCTACTTTTCCACCTTGTCT
AGTGTGTTTTGTTCCGTAAGTCCCCAGTTTGCTGGCAATAGAATTCCAGGTGAGCAACAG
AAATGCATGATCTTGGGAAGAGATTCTGATGTTAATGTTGTACTTGTTAGAATAAGTCCT
GGAAGCAGTGAGGCTGAGGTTCTCCAGTCATTGCTTTCTGATCCGGATTGTGATTCCATA
CATATCACTGATAACTTTGTTGATAGGATGCTTTATCGCTTCAAAGATGACTGGAAGTCT
GCACTTGGTGCTTTTAGATGGGCACAATCACGTCCTGGCTACAATCCCTCACCAGAATTG
TACGATAAGTTGGTAGATATACTGGGAAAGATGAAGAAAATGGAAAAGATGCACTCATTG
ATAGACGAAATGCATGCAAACCATCTTGTTTCTCTCAACACAATAGCAAAAGTTATGAGA
AGGTTTGCAGGTGCAGGAGAGTGGAAAGAAGCAGTGAGGACATTTGACGAGTTGGGAAAA
TTCGGTTTGGAGAAGAATACAGAATCAATGAATCTGTTACTAGACACTTTGTGCAAAGAA
AATAAAGTCCAACAGGCACGTGAAATTTTTTCCGAGCTCAAGTCGCATATACCACCAAAT
GCAAACACGTTTAACGTTTTTATTCATGGTTGGTGCAAAGTTAATCGGGTAGAAGAAGCG
TACTGGACAATTCAGGAGATGAAAGGCAATGGTTGTTCTCCTTGCGTCATCAGCTACTCA
ACAATCATCATGTCCTACTGCCAGCAATTTAACTTCCAGAGGGTCTACGAGCTGCTTGAT
GATATGCAAGGACTGGGATGTGTACCAAATGTTGTCACTTTCACCACCATCATGTGTTTC
TTGACAAAATCAGGGGCATTTGAGGAAGCCCTTAAGATTGCTGAGAGGATGAAATCAGTT
GGTTGTAAACCTGATACACTTTTCTACAACGCTCTGATTCATACATTAGGCAGGGCGCAC
CGATTACAAGAAGCTACTCGTGTCTTGAAGGTTGAAATGCCCAGAAATGGTGTTCAACCT
AATACATCGACGTATAATACTATCATTGCCATGTTTTGCCATCACTCGCAAGCGGAAAGT
GCGCTAGAATTTTTAAGGGACCTGGAAAGTTCACCATATTGTAAACCTGATGTTCAGTCA
TACTTTCCGCTGCTCAAGTTGTGCTTTAAAGTTGGGAAGACAGATGATTTCCTGAATAAG
TTGGTGAATGACATGGTTAATAAGCATCATCTAAGTCTTGATCTATCAAGTTATACACTT
CTTATCCATGGTTTGTGCAGAGCAAATAAATGTGAATGGGCCTATCTTGTTTTTGAGGAT
ATGATCCGCCAAGAGATTACTCCTCGATACAAGACATGCAGTGTGCTACTGCAGGAAATC
AAACAGAAGAATATGCATGATGCTGCCGATAGGATTGAATTGTTCATGAAGAAAATGAAG
ACCTCCTGA

Peptide Sequence

PEP ID

XP_016498742.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial-like [Nicotiana tabacum]
Sequence

MKFYARKLPFRYISVSLPFGVCNISNVPCKSCFSYFSTLSSVFCSVSPQFAGNRIPGEQQ
KCMILGRDSDVNVVLVRISPGSSEAEVLQSLLSDPDCDSIHITDNFVDRMLYRFKDDWKS
ALGAFRWAQSRPGYNPSPELYDKLVDILGKMKKMEKMHSLIDEMHANHLVSLNTIAKVMR
RFAGAGEWKEAVRTFDELGKFGLEKNTESMNLLLDTLCKENKVQQAREIFSELKSHIPPN
ANTFNVFIHGWCKVNRVEEAYWTIQEMKGNGCSPCVISYSTIIMSYCQQFNFQRVYELLD
DMQGLGCVPNVVTFTTIMCFLTKSGAFEEALKIAERMKSVGCKPDTLFYNALIHTLGRAH
RLQEATRVLKVEMPRNGVQPNTSTYNTIIAMFCHHSQAESALEFLRDLESSPYCKPDVQS
YFPLLKLCFKVGKTDDFLNKLVNDMVNKHHLSLDLSSYTLLIHGLCRANKCEWAYLVFED
MIRQEITPRYKTCSVLLQEIKQKNMHDAADRIELFMKKMKTS

Transcript Sequence

Gene sequence data has not been registered.